New software aids chemical and biological system studies

Researchers at Wayne State University are poised to revolutionize computational materials design by developing innovative software backed by a $600,000 grant from the National Science Foundation.

This three-year project, led by Dr. Jeffrey Potoff and Dr. Loren Schwiebert, aims to create high-performance Monte Carlo software that enables rigorous multi-scale simulations, allowing scientists to study complex chemical and biological systems with unprecedented precision. By integrating Monte Carlo and molecular dynamics algorithms, the new software promises to reduce latency and increase sampling efficiency, thereby facilitating the design of novel materials with tailored properties.

This cutting-edge technology is expected to have far-reaching implications across various industries, from gas separation and storage to rare earth element separation, and will be made available as open-source software to the research community, complete with training materials and user-friendly workflows.

Introduction to Computational Materials Design

Developing new materials with tailored properties is a crucial aspect of advancing various fields, including chemistry, biology, and engineering. To achieve this, researchers rely on physics-based computer simulations that can predict the relationship between atomic-level interactions and physically observable properties of materials—a team of researchers at Wayne State University, led by Drs. Jeffrey Potoff and Loren Schwiebert have been awarded a National Science Foundation (NSF) grant to develop new software that supports computational materials design.

The software, known as GOMC, is designed to perform high-performance Monte Carlo simulations, which are essential for understanding the behavior of complex systems. The goal of this project is to reduce latency in Monte Carlo/molecular dynamics (MC/MD) cycles and enable rigorous multi-scale simulations, allowing researchers to simulate systems of larger scale and fidelity than is currently possible. This will provide valuable insights into the properties of materials and facilitate the design of new materials with specific characteristics.

The development of GOMC is built on a 15-year collaborative effort between Drs. Potoff and Schwiebert, who bring their expertise in chemical engineering and computer science to the project. The software will be open-source, making it accessible to researchers across various fields, from the design of novel adsorbents for gas separation and storage to the development of new surfactants for rare earth element separation.

Monte Carlo and Molecular Dynamics Simulations

Monte Carlo and molecular dynamics algorithms are two distinct approaches used in computational materials design. Monte Carlo simulations involve random sampling of possible configurations to estimate the properties of a system, while molecular dynamics simulations model the motion of particles over time. Each approach has its unique features, but combining them into a single simulation can be challenging due to the complexity of the code bases.

The researchers’ approach is to use a separate Python driver program to control interactions between two separate codes, which remain largely unchanged. This strategy is designed to substantially reduce development time while providing respectable code performance. By integrating Monte Carlo and molecular dynamics simulations, researchers can take advantage of the strengths of each approach and simulate complex systems with greater accuracy.

The project aims to provide a user-friendly interface for performing common molecular dynamics, Monte Carlo, and hybrid MC/MD simulations. To achieve this, the researchers will develop training materials, including Python workflows and videos, that provide instructions on how to use the software. This will lower barriers for new users and enable them to take full advantage of the capabilities of GOMC.

Applications of Computational Materials Design

The development of new materials with tailored properties has numerous applications across various fields. For example, in the field of energy storage, researchers can design novel adsorbents for gas separation and storage, which can improve the efficiency of energy storage systems. In the field of biotechnology, computational materials design can be used to develop new surfactants for rare earth element separation, which is essential for the production of advanced materials.

The use of computational materials design can also facilitate the development of new materials for biomedical applications, such as tissue engineering and drug delivery. By simulating the behavior of complex systems, researchers can design materials with specific properties that can interact with biological systems in a controlled manner. This can lead to the development of new therapies and treatments for various diseases.

The impact of computational materials design extends beyond the scientific community, as it can also drive economic growth and improve the quality of life. By developing new materials with tailored properties, industries such as manufacturing, energy, and healthcare can benefit from improved efficiency, reduced costs, and enhanced performance.

Software Development and Dissemination

The development of GOMC is a significant step towards advancing computational materials design. The software will be open-source, allowing researchers to access and modify the code to suit their specific needs. The researchers will also provide training materials and support to ensure that new users can take full advantage of the capabilities of GOMC.

The dissemination of GOMC will be facilitated through various channels, including research publications, conferences, and workshops. The researchers will also engage with industry partners and other stakeholders to promote the adoption of computational materials design in various fields. By making GOMC widely available, the researchers aim to accelerate the development of new materials and technologies that can benefit society as a whole.

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