Homomorphic Encryption Speeds Cloud Machine Learning, Boosts Data Privacy

The increasing demand for privacy-preserving computation, particularly within cloud-based machine learning services, necessitates efficient implementations of cryptographic techniques such as Fully Homomorphic Encryption (FHE). These schemes enable computations on encrypted data without requiring decryption, thereby safeguarding sensitive information. Carlos Agulló-Domingo, Oscar Vera-López, Seyda Guzelhan and colleagues present FIDESlib, a new open-source library designed to accelerate CKKS, a prominent FHE scheme, utilising the parallel processing capabilities of Graphics Processing Units (GPUs). Their work addresses performance limitations in existing CPU-based libraries, such as OpenFHE, offering a fully interoperable server-side solution with optimised GPU kernels for all core CKKS operations, including the computationally intensive bootstrapping process. The research, detailed in their paper, ‘FIDESlib: A Fully-Fledged Open-Source FHE Library for Efficient CKKS on GPUs’, demonstrates substantial performance gains over current implementations, achieving up to a 70x speedup in bootstrapping.

Cloud machine learning introduces escalating data security challenges from both conventional and quantum threats, prompting a need for advanced cryptographic solutions. Increasing reliance on Machine-Learning-as-a-Service (MLaaS) platforms creates significant data security vulnerabilities, as cloud providers remain susceptible to data breaches. Anticipated advancements in quantum computing further exacerbate these risks, necessitating proactive development of quantum-resistant cryptography.

Lattice-based cryptography presents a promising defence against these emerging threats, offering post-quantum resistant standards now endorsed by the National Institute of Standards and Technology (NIST). Specifically, schemes like CKKS, a variant of Ring-Learning-With-Errors (RLWE), are gaining prominence for privacy-preserving approximate computing, allowing machine learning operations to be performed on encrypted data. Ring-Learning-With-Errors (RLWE) is a mathematical problem forming the basis of many post-quantum cryptographic schemes, offering security against attacks from both classical and quantum computers. However, implementing these cryptographic schemes introduces computational overhead, hindering practical application in real-time machine learning inference.

Current implementations of CKKS incur a performance penalty, creating a critical bottleneck for widespread cloud deployment. OpenFHE represents a leading library supporting these operations, yet its server-side performance remains a limitation, prompting exploration of alternative acceleration strategies. Consequently, leveraging the growing prevalence of Graphics Processing Units (GPUs) in high-performance computing environments is becoming increasingly attractive.

Modern fully homomorphic encryption (FHE) libraries are now incorporating GPU support to accelerate computations, aiming to fully utilise the parallel processing capabilities of GPUs and overcome the limitations of CPU-based implementations. Achieving efficient GPU acceleration requires careful optimisation of cryptographic primitives and a software architecture that can effectively harness the power of these parallel processors.

The development of FIDESlib addresses a critical performance bottleneck in practical applications of Fully Homomorphic Encryption (FHE) within cloud-based Machine-Learning-as-a-Service (MLaaS) paradigms. FIDESlib emerges as a solution by introducing the first open-source, server-side CKKS GPU library designed for seamless interoperability with existing OpenFHE client-side operations, offering a significant advancement in performance.

A key innovation within FIDESlib lies in its focused architectural approach, streamlining its design to maximise performance by concentrating solely on the CKKS scheme and leveraging the parallel processing capabilities of GPUs. The library implements heavily optimised GPU kernels for all core CKKS primitives, including the computationally intensive bootstrapping process. Bootstrapping is a crucial operation in FHE that allows for the continued encryption of data even after multiple computations, effectively resetting the noise level and maintaining security. FIDESlib also incorporates robust benchmarking and testing infrastructure, ensuring ongoing adaptability and facilitating further optimisation efforts.

The design of FIDESlib anticipates future scalability, structuring its software architecture to support the integration of a multi-GPU backend, enabling even greater acceleration by distributing computations across multiple graphics processing units. Performance evaluations demonstrate a substantial advantage over existing solutions, including the leading open-source CKKS library, Phantom, and the AVX-optimised OpenFHE implementation, achieving a speedup of at least 70x in bootstrapping operations.

The development of FIDESlib builds upon a growing body of research into hardware acceleration for FHE, drawing upon prior work exploring memory-aware design techniques and GPU-based microarchitectural extensions. Furthermore, the use of platforms like HIP, an open-source alternative to CUDA, allows for portability across different GPU architectures, broadening its applicability and reducing vendor lock-in.

Fully Homomorphic Encryption (FHE) schemes, notably CKKS, are attracting increasing attention due to their capacity to deliver privacy-preserving, approximate computation within Machine-Learning-as-a-Service (MLaaS) cloud environments. Current research concentrates heavily on accelerating FHE implementations, with a significant trend towards leveraging Graphics Processing Units (GPUs) to enhance performance. OpenFHE represents a leading CPU-based FHE solution with robust CKKS operations, yet its server-side performance currently limits practical cloud deployment.

Recent investigations reveal a strong focus on hardware acceleration, particularly through custom hardware designs and GPU implementations, demonstrating the potential for significant performance gains. Several studies demonstrate the benefits of optimising bootstrapping through algorithmic improvements and hardware acceleration. The development and optimisation of FHE libraries, including HElib, SEAL, and OpenFHE, also constitute a prominent area of research.

Experiments demonstrate that FIDESlib delivers superior performance and scalability compared to other open-source CKKS libraries, such as Phantom, achieving a speedup of at least 70x over the AVX-optimised OpenFHE implementation for bootstrapping. These results highlight the potential of GPU-based acceleration to overcome performance limitations and facilitate the practical deployment of FHE in cloud environments. Researchers are actively investigating memory-aware design techniques and the application of platforms like AMD’s HIP to further enhance acceleration capabilities.

The research landscape surrounding Fully Homomorphic Encryption (FHE) demonstrably prioritises acceleration and optimisation of implementations, particularly for schemes like CKKS. Recent publications reflect a rapidly evolving field focused on translating theoretical cryptographic advances into practical applications. A significant emphasis exists on addressing performance bottlenecks through both hardware and software approaches.

Current efforts actively pursue improvements across multiple facets of FHE systems, enhancing efficiency and refining bootstrapping techniques, a computationally intensive process crucial for maintaining the integrity of encrypted data. Simultaneously, substantial investment occurs in hardware acceleration, with designs ranging from Application-Specific Integrated Circuits (ASICs) and Field-Programmable Gate Arrays (FPGAs) to utilising the parallel processing capabilities of Graphics Processing Units (GPUs). Software optimisation complements these hardware advances, aiming to maximise performance on existing infrastructure through refined algorithms and libraries.

Memory management presents a persistent challenge, as FHE operations inherently demand substantial memory resources, necessitating the development of efficient memory management techniques. Research actively explores techniques to mitigate these requirements, enabling deployment on resource-constrained systems. A growing body of work investigates the application of FHE to real-world problems, notably within the domain of machine learning, demonstrating the potential for privacy-preserving data analysis and cloud services.

The emergence of libraries like OpenFHE, HELib, and SEAL signifies a move towards standardised, accessible FHE tools. However, achieving optimal server-side performance remains a key objective, as evidenced by the development of FIDESlib, a GPU-accelerated library designed for interoperability with existing client-side implementations. FIDESlib’s focus on heavily optimised GPU kernels for all CKKS primitives, including bootstrapping, demonstrates a commitment to addressing performance bottlenecks and achieving substantial speedups.

Future research directions likely involve exploring multi-GPU architectures to further enhance acceleration capabilities. Continued refinement of bootstrapping techniques, alongside advancements in memory management, will be crucial for broadening the applicability of FHE. Furthermore, investigations into the trade-offs between computational efficiency, approximation accuracy, and security levels will be essential for tailoring FHE solutions to specific application requirements. The development of robust benchmarking and testing methodologies will also play a vital role in ensuring the reliability and adaptability of FHE systems.

👉 More information
🗞 FIDESlib: A Fully-Fledged Open-Source FHE Library for Efficient CKKS on GPUs
🧠 DOI: https://doi.org/10.48550/arXiv.2507.04775

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